From: A Metastate HMM with Application to Gene Structure Identification in Eukaryotes
Software name | Nucleotide level | Full-exon level | |||||
---|---|---|---|---|---|---|---|
 | E[sn] | E[sp] | AC | E[(sn + sp)/2] | E[SN] | E[SP] | E[(SN + SP)/2] |
Genie | 0.91 | 0.90 | 0.89 ± 0.16 | 0.905 | 0.71 | 0.70 | 0.71 ± 0.30 |
Genscan | 0.95 | 0.90 | 0.91 ± 0.12 | 0.925 | 0.70 | 0.70 | 0.70 ± 0.32 |
HMMgene | 0.93 | 0.93 | 0.91 ± 0.13 | 0.93 | 0.76 | 0.77 | 0.76 ± 0.30 |