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Table 7 UCSC genome of 12 organisms

From: Novel methodologies for spectral classification of exon and intron sequences

OG Clade Genome Assembly Track Table Type Number
1 Mammal Human Feb. 2009 (GRCh37/hg19) UCSC Genes knownGene Exon
Intron
35685
532489
2 Mammal Mouse July 2007 (NCBI37/mm9) UCSC Genes knownGene Exon
Intron
27452
43041
3 Mammal Pig Nov. 2009 (SGSC Sscrofa9.2/susScr2) Ensembl Genes ensGene Exon
Intron
11499
113946
4 Vertebrate Chicken May 2006 (WUGSC 2.1/galGal3) Ensembl Genes ensGene Exon
Intron
12045
57770
5 Vertebrate Zebrafish Jul. 2010 (Zv9/danRer7) RefSeq Genes refGene Exon
Intron
7838
78776
6 Deuterostome C. intestinalis Mar. 2005 (JGI 2.1/ci2) Ensembl Genes ensGene Exon
Intron
7360
86885
7 Deuterostome S. purpuratus Sep. 2006 (Baylor 2.1/strPur2) Other RefSeq xenoRefGene Exon
Intron
4888
193451
8 Insect D. melanogaster Apr. 2006 (BDGP R5/dm3) RefSeq Genes refGene Exon
Intron
37925
35403
9 Insect A. mellifera Jan. 2005 (Baylor 2.0/apiMel2) Ensembl Genes ensGene Exon
Intron
21827
47605
10 Nematode C. elegans May 2008 (WS190/ce6) RefSeq Genes refGene Exon
Intron
25360
37359
11 Nematode C. japonica Mar. 2008 (WUGSC 3.0.2/caeJap1) Other RefSeq xenoRefGene Exon
Intron
7978
30958
12 Other Sea hare Sept. 2008 (Broad 2.0/aplCal1) Other RefSeq xenoRefGene Exon
Intron
6914
431792
  1. Group: Genes and Gene Prediction Tracks. SL = 300 bases.
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