Smooth eigenvalue correction
- Anne Hendrikse^{1}Email author,
- Raymond Veldhuis^{1} and
- Luuk Spreeuwers^{1}
https://doi.org/10.1186/1687-6180-2013-117
© Hendrikse and et al.; licensee Springer. 2013
Received: 20 May 2012
Accepted: 21 May 2013
Published: 12 June 2013
Abstract
Second-order statistics play an important role in data modeling. Nowadays, there is a tendency toward measuring more signals with higher resolution (e.g., high-resolution video), causing a rapid increase of dimensionality of the measured samples, while the number of samples remains more or less the same. As a result the eigenvalue estimates are significantly biased as described by the Marčenko Pastur equation for the limit of both the number of samples and their dimensionality going to infinity. By introducing a smoothness factor, we show that the Marčenko Pastur equation can be used in practical situations where both the number of samples and their dimensionality remain finite.
Based on this result we derive methods, one already known and one new to our knowledge, to estimate the sample eigenvalues when the population eigenvalues are known. However, usually the sample eigenvalues are known and the population eigenvalues are required. We therefore applied one of the these methods in a feedback loop, resulting in an eigenvalue bias correction method.
We compare this eigenvalue correction method with the state-of-the-art methods and show that our method outperforms other methods particularly in real-life situations often encountered in biometrics: underdetermined configurations, high-dimensional configurations, and configurations where the eigenvalues are exponentially distributed.
Keywords
1 Introduction
In data modeling, in order to give a meaningful interpretation of input samples, a description of the data generating process is needed. Often little is known about this process beforehand and the description consisting of a model and its parameters has to be derived from a set of examples, called the training set. Since the number of samples is usually limited in this training set, a model is chosen beforehand: The generation of this set is modeled as drawing samples from a random process P(x), where the distribution of this random process is approximated by a multivariate normal distribution $\mathcal{N}\left(\mu ,\Sigma \right)$.
There are two reasons for modeling the distribution with $\mathcal{N}\left(\mu ,\Sigma \right)$. Firstly, a normal distribution has the highest entropy for a given variance. Therefore, according to the principle of maximum entropy, the normal distribution is the best choice if no further information about the distribution is available [1]. Secondly, for a multivariate normal distribution, only the second-order statistics have to be determined. the estimates of higher-order statistics in high-dimensional data can be highly distorted as shown in [2], but, as we will show, even the estimation of the second-order statistics may be severely distorted.
are often used as estimates. Here N is the number of samples in the training set, where each sample is a column vector with p elements, denoted by x _{ k }.
It is known that the sample distribution $\mathcal{N}\left(\widehat{\mu},\widehat{\Sigma}\right)$ is not a good estimate of the population distribution $\mathcal{N}\left(\mu ,\Sigma \right)$ ([3] or see for example our demonstration in [4]), because even though the elements of the sample covariance matrix are unbiased estimates of the elements of the population covariance matrix, the eigenvalues of the sample covariance matrix, the sample eigenvalues L = {l _{ k }|k = 1…p}, are biased estimates of the eigenvalues of the population covariance matrix which are the population eigenvalues Λ = {λ _{ k }|k = 1…p}. In [5] it has even been suggested to abandon the estimation of $\widehat{\Sigma}$ altogether. In classical (LSA), sample eigenvalues seem unbiased because it is assumed that the number of samples is large enough to fully determine the statistics of the sample covariance matrix.
However, many applications evolve in such a way that the dimensionality of the sample space increases as fast as or even faster than the number of samples in training sets. For example, in face recognition, the resolution of face images has increased considerably because high-resolution devices have become available at modest costs, and the dimensionality of the sample space is related to the image resolution. The number of training samples depends on the number of test subjects available and the effort that can be put in collecting the data. As a result, in one of the databases with the largest number of subjects, the FRGC2 database [6] has images of approximately 500 individuals, while the feature vectors can easily reach a dimensionality of 10,000.
If the dimensionality is in the same order or even higher than the number of samples, (LSA) no longer gives accurate predictions of the statistics of the estimators. In (GSA) the dimensionality of the samples is also considered and is therefore more applicable than (LSA) as will be discussed in Section 2.1.
In Figure 1 the first part models how the sample eigenvalues are obtained. In the model, the data-generating process generates samples for a training set X by drawing samples from a normal distribution with a set eigenvalues Λ, the population eigenvalues. From the training set a sample covariance matrix $\widehat{\Sigma}$ is estimated. The decomposition of the matrix results in sample eigenvalues L. This process can be modeled as a function B (Λ) = L. Bias correction can then be interpreted as applying an estimate of the inverse of B to the sample eigenvalues, which results in ${\widehat{\mathit{\Lambda}}}^{c}$, the estimate of the population eigenvalues after correction.
One aspect of analyzing eigenvalue estimation with (GSA) is that eigenvalue estimation is considered in the limit that the dimensionality of the samples becomes infinitely large. Therefore, instead of considering the eigenvalue set, an eigenvalue distribution description is used as explained in Section 2.1. The Marčenko Pastur equation in fact does not give a relation between the sample eigenvalues and the population eigenvalues, but between the corresponding distributions in the (GSA) limit.
Of course, in practice, the dimensionality of the samples and the number of samples are not infinite, and the Marčenko Pastur equation cannot be used directly to correct the bias in the sample eigenvalues. However, as we will show in Section 2.4, by applying a smoothing operation to both the population distribution estimate and the sample eigenvalue distribution estimate, the relation between the two smoothed distributions is still accurately described by the Marčenko Pastur relation.
Because the Marčenko Pastur equation does relate the two smoothed distributions, we could develop two methods in Section 2.5, a polynomial method and a fixed point method, which both give a smoothed estimate of the sample eigenvalue density given a set of population eigenvalues. But in practice, bias correction is often desired, which equals to estimating the population eigenvalues corresponding to a set of sample eigenvalues. In Section 2.6 we derive two methods that can estimate a set of population eigenvalues given a set of sample eigenvalues. The fixed point bias correction method uses the fixed point sample eigenvalue density estimator, which shows that population eigenvalue to sample eigenvalue estimators do have their application.
In Section 3 we present several experiments. First we illustrate the effectiveness of the two sample eigenvalue density estimation methods: We show that the polynomial method makes good estimates of the sample eigenvalue densities if the number of population eigenvalue clusters is low, but fails if that number increases. Second we also show that the number of required iterations of the fixed point method increases if we decrease the smoothness of the estimation.
We then compare the fixed point bias correction method with a state-of-the-art bias correction method by Kaorui [7] and a bootstrap bias correction method we presented in [10]. The fixed point method performs well in all experiments and excels in two real-life examples we often encountered in biometrics. In Section 4 we present conclusions based on these experiments.
2 Bias of the sample eigenvalues
2.1 Large sample analysis of eigenvalue bias
Bias is a statistic of an estimator and in order to find the statistics of estimators, often the classical (LSA) is performed. In (LSA) the statistics of an estimator are determined for the limit N → ∞, where N is the number of samples. With (LSA), the sample eigenvalues seem to be unbiased. However, in many applications N is of the same order as the dimensionality of the sample space, p and (LSA), which provides inaccurate statistics.
2.2 General statistical analysis of eigenvalue bias
In (GSA) [11] the limit N,p → ∞ while $\frac{p}{N}\to \gamma $ is considered, where γ is some positive constant. Applying (GSA) to eigenvalue estimation does show a bias in the estimates.
where u(x) is the unit step function.
As is discussed in [9] both transforms could be used, as the two spectra only differ in (n - p) zero-valued eigenvalues. It is argued that the form with ${v}_{{G}_{p}}\left(z\right)$ makes the study of analytical properties more simple. Notation wise, this form also results in more compact expressions. Note that with finite sample analysis, which will be discussed in the next section, this choice of representation is not that arbitrary and depends on whether n > p.
We now quote Theorem 1 from [7], which gives the (MP) equation and the conditions under which it holds:
Theorem 1. Suppose the data matrix X can be written $X=Y{\Sigma}_{p}^{\frac{1}{2}}$, where Σ _{ p } is a p ×p positive definite matrix and Y is an n ×p matrix whose entries are independent and identically distributed (real or complex), with E (Y _{ i.j }) = 0, E (|Y _{ i,j }|^{2}) = 1 and E (|Y _{ i,j }|^{4}) < ∞.
- 1.
${v}_{{G}_{p}}\to {v}_{\infty}\left(z\right)$, A.s., where v _{ ∞ } (z) is a deterministic function
- 2.v _{ ∞ } (z) Satisfies the equation$-\frac{1}{{v}_{\infty}\left(z\right)}\phantom{\rule{1em}{0ex}}=\phantom{\rule{1em}{0ex}}z-\gamma \int \frac{\lambda \mathrm{d}{H}_{\infty}\phantom{\rule{0.3em}{0ex}}\left(\lambda \right)}{1+\lambda {v}_{\infty}\phantom{\rule{0.3em}{0ex}}\left(z\right)},\forall z\in {\mathbb{C}}^{+}$(6)
- 3.
The previous equation has one and only one solution which is the Stieltjes transform of a measure.
Equation 6, the (MP) equation, fully characterizes the sample eigenvalue distribution G _{ ∞ } if the population eigenvalue distribution is known. However, the question at hand is to derive a method that reduces the bias in the sample eigenvalues, that is, rewrite Equation 6 in the form Λ = B ^{-1}(L).
2.3 Finite sample analysis of eigenvalue distribution
Both (LSA) and (GSA) apply limit analysis to find a relation between the population eigenvalue set and the sample eigenvalue sets. However, for several data distributions, results are available for the eigenvalue distribution for the limited N and p case. For classes of random complex Gaussian vectors, the distributions of the eigenvalues of the covariance matrices have been found, and these results are applied in for example wireless communication. A review of much of the work on this topic is given in [12]. Based on the work in that field, in [13], the joint (CDF) of the eigenvalues of complex Wishart (for the case n > p) and pseudo-Wishart (n ≤ p) random matrices, where the common covariance matrix are found, can take the form of an arbitrary full-rank Hermitian matrix.
These results rely on the assumption that the data can be modeled as proper complex Gaussian random vectors (Section II in [14]), which is not the case if the data have only a real component. Indeed, the results on the distribution of the eigenvalues of Wishart matrices of real data derived in [15] and [16] differ considerably, suggesting that in the finite N case, the bias in the sample eigenvalues depends on whether the data is real or complex.
In comparison to the (GSA) analysis, the finite sample analysis have strong requirements on the distribution of the data. Verifying the distribution of the data seems to become harder as the dimensionality increases (see for the discussion on Gaussianity in [2]), therefore increasing the risk of using the wrong distribution assumption. On the other hand, the rate of convergence to the results of the (GSA) analysis is still an active research topic (Section 3.2 in [3]), although some results suggest some error measures decrease by an order of ${N}^{-\frac{1}{4}}$. Nonetheless, the question of when to switch from the finite sample analysis to the (GSA) limit is still an open question.
In our experiments with the Muirhead eigenvalue correction [16], we found that for a dimensionality in the order of a few 100, the correction already had significant distortions, and strong modifications to the correction method had to be made [17]. We therefore continue to use the (GSA) analysis and derive methods from those results.
2.4 Smooth eigenvalue estimation
The Marčenko Pastur equation describes the relation between the sample eigenvalue distribution and the population eigenvalue distribution in the (GSA) limit, but in practice both N and p are finite. However we assume that the global characteristics already converge for lower values of N and p, and higher values of N and p are only required if very local details have to be considered. To support this assumption we consider the curves in Figure 2 again. The empirical distribution function is always staircase shaped as shown in 2a, with at most p jumps of at least height $\frac{1}{p}$, so that the curve can only contain local details if p is large enough. For an exact definition of local detail, see Appendix 4.
Based on the assumption of convergence of global characteristics for lower p and N values, we show that by varying the imaginary value of z, we can control the influence of local details and global characteristics in Equations 6 and 4. We will use this result later on to derive algorithms which can be used in practical situations.
In order to find the sample eigenvalue density given the population eigenvalue distribution, Equation 6 has to be solved with I {z} ↓ 0. However, as long as we use empirical distributions, setting I {z} = 0 will lead to several problems. For example, the Stieltjes transform of the empirical sample eigenvalue distribution will become infinite at the sample eigenvalues and real valued anywhere else. If, on the other hand, we solve Equation 6 with I {z} with some fixed positive constant y, we find the empirical sample eigenvalue density convolved with the Cauchy kernel $\frac{1}{\pi}\left[\frac{y}{{x}^{2}+{y}^{2}}\right]$, as noted in [3].
The result of the integrals in Equations 4 and 6 is determined by the mapping of the distribution function along this circle. In case q is small, only a small part of the real axis is mapped to other positions than the infinity points. If any probability mass is repositioned, it will still be mapped to the infinity points and so the change will have little effect on the result of the integral, unless the change is in the neighborhood around r = 0. So for small q, the results of the integrals are only sensitive to a small part of the density function.
If on the other hand q is large, much more of the real axis is mapped to other positions than the infinity points. In that case changes of position of density in a large neighborhood around r = 0 have an effect on the result of the integral. In the extreme cases, for q ↓ 0, the integration result is determined by one point on the distribution curve, which gives an explanation of the limit in the inverse Stieltjes transform. If q → ∞, the results are solely determined by the means of the distributions. An exact proof of these claims is given in Appendix Appendix 1.
Because of this mapping the result of the integral is bounded by the circle (see the proof in Appendix Appendix 2), which is a more strict property than the well-known condition I{m _{ G }(z)} ≤ 1/I{z} [19]. This limit is used for choosing a starting point in the fixed point algorithm in Section 2.5.2, and the limit is also used as an upper bound of the minimal value of I(z) for which the fixed point algorithm converges Appendix 3).
The observation about the sensitivity of the integral results for variations of the distributions is used in the following sections where we first derive an algorithm to find a smoothed estimate of the sample eigenvalues if the population eigenvalues are known. We then use this algorithm in a feedback algorithm to find an estimate of the population eigenvalues given that the sample eigenvalues are known.
2.5 From population eigenvalues to sample eigenvalues
In the previous section we showed that by setting I{z} low or high, we can control how much effect local details of the distributions have on the Stieltjes transform of the empirical sample eigenvalue density and consequently in the (MP) equation. This means we can approximate the distributions with the empirical distributions if we set I{z} high enough.
To find the corresponding sample eigenvalue density$\u011d\left(l\right)$ , ${\widehat{v}}_{p}\left(z\right)$has to be solved from Equation 9. We present two solutions: a polynomial method and a fixed point method.
2.5.1 Polynomial method
In this section we will derive and analyze a polynomial method, which was already found by Rao and Edelman [20]. Their derivation has a solid embedding in random matrix theory, but it is less focussed on the application we discuss in this article.
We derive the polynomial method by rewriting Equation 9 to a polynomial expression by multiplying both sides of the equation with${\widehat{v}}_{p}\left(z\right)\prod _{k=1}^{p}\left(1+{\lambda}_{k}{\widehat{v}}_{p}\left(z\right)\right)$ . The new expression can be rewritten to an expression of the form $0=\prod _{k=0}^{p+1}{c}_{k}{\widehat{v}}_{p}^{k}\left(z\right)$, which then can be solved using standard polynomial solving tools.
A problem with this method is that if the number of eigenvalues increases, the order of the polynomial increases and the roots of the higher order polynomial become numerically unstable. As observed in the experiments, the polynomial solution becomes unreliable above 10 eigenvalues. The advantage of the method is that it can solve Equation 9 for arbitrarily small I {z} values, even 0.
The numerical issues with root finding is a well-known problem. Wilkinson, for example, demonstrated it in [21]. One approach to mitigate the numerical dependency on the coefficients of the polynoom is to use a basis different from the monomial basis. This has been demonstrated successfully in polynomial approximation by using Lagrange polynomials in [22]. As the outcomes are limited by a circle as described in Section 2.4, maybe a similar approach as used in the Lindsey-Fox method [23] could be used. However, this large field of study is beyond the scope of this paper, so we do not go further into this subject.
2.5.2 Fixed point method
Our hypothesis is that Equation 10 is indeed a fixed point algorithm, where A _{ n } converges to a fixed point if the output of iteration n A _{ n } is repeatedly used as input again in iteration n + 1. In Appendix 4 we prove the convergence for a minimal value of I{z}; but we observed that if we set I{z} below this value, we still get a good approximation; however, the number of iterations required increases.
Since the solution should be within the limit circle, as described in Section 2.4, we use the center of that circle as a starting point. Furthermore, it was pointed out to us that a considerable speedup can be achieved if (part of) the evaluation of Equation 10 for all evaluation points can be done using the (FMM) method [25, 26]. The summation can be rewritten to the form of Equation (5.1) in [27] by choosing c _{ k } = -λ _{ k }, φ(x) = 1/x, x = A, and x _{ k } = λ _{ k }. Using the (FMM) method, the evaluation of one of the iteration could potentially be sped up from$\mathcal{O}\left(\mathit{\text{mp}}\right)$, with m the number of evaluation points, to$\mathcal{O}\left(m+p\right)$.
The result of both the polynomial method and the fixed point method is an estimate of the Stieltjes transform of the sample eigenvalue distribution. But in general the sample eigenvalues are required. Using the inverse Stieltjes transform (Equation 7), the sample eigenvalue density can be found, but it is convoluted with the Cauchy density, since the chosen values of z have an imaginary value larger than 0. Finding the sample eigenvalue density by deconvolution is hard since the estimate should have zero density for negative values and it should be nonnegative everywhere. Furthermore, the Cauchy density has an infinite variance, and the convolved density is only known on fixed positions (ℜ{z}).
Although the methods do not give an estimate of the sample eigenvalues themselves, they can still be useful. One application is to use them to test whether the candidate population eigenvalue sets match with the measured sample eigenvalues. First the sample eigenvalue density corresponding to this candidate population eigenvalue set is estimated. If this estimated sample eigenvalue density does not match the empirical density of the measured sample eigenvalues, the candidate population eigenvalue set is probably not a good candidate. One particular candidate could be the measured sample eigenvalues themselves. If they do not match, then the measured sample eigenvalues are probably considerably biased estimates of the original population eigenvalues as well.
2.6 Sample eigenvalues to population eigenvalues
Although methods for determining the sample eigenvalues if the population eigenvalues are known do have applications (see the example in the previous section), methods that can often determine the population eigenvalues belonging to a set of sample eigenvalues are desired. There already exist several methods designed to perform this action (see [7, 10]), where the method developed by Karoui can be considered the state-of-the-art at the moment. The method is based on the (MP) equation as well, but it lacked the explanation of how to deal with finite p and N. Moreover, it also estimates the population distribution instead of a set of eigenvalues, making it less suited for a number of practical problems.
Some of these problems are encountered in biometrics, where the distribution of the sample eigenvalues suggests that there are a few significant eigenvalues and the remainder form some bulk. If individual eigenvalues are of importance, then the distribution description used in the Karoui method is less suited, as is also shown in the experimental results presented in Section 3.
We therefore designed two new methods based on the theory and methods presented in the previous sections. Particularly, the second method has several advantages over the existing methods. Firstly, it estimates the population eigenvalues directly instead of a density estimate and secondly, as will be shown in the experiments, the method performs better for a number of practical situations.
2.6.1 Direct density estimation solution
where v ^{ -1 }(c) is the function which solves z from c = v _{ ∞ }(z).
The reason for choosing$\stackrel{~}{z}$ as a parameter and determining the corresponding z instead of choosing z and calculating the corresponding$\stackrel{~}{z}$ is twofold: Firstly, in Section 2.4 it was noted that if the inverse transform is applied with an argument with a non-zero imaginary part, a density is determined which is a convolution of the original density with the Cauchy kernel. The width of the convolution kernel is determined by$I\left\{\stackrel{~}{z}\right\}$. Secondly, the point at which this density is determined is controlled by$\Re \left\{\stackrel{~}{z}\right\}$. If z is chosen as variable, both parameters are difficult to control.
There are four major problems with implementing this method. First of all, the evaluation of Equation 13 requires an implementation of v ^{-1}(c), which is not straightforward. Secondly, the method suffers from numerical instabilities which are hard to predict in advance. The method also requires deconvolution and combined with the numerical instabilities, this can easily lead to large errors. The last problem of the method is that it finds an eigenvalue density description instead of a set of eigenvalues. Because of these problems, we do not use the method any further.
2.6.2 Feedback correction
In Section 2.5 we derived two algorithms that can estimate a sample eigenvalue density convolved with a Cauchy density corresponding to a set of population eigenvalues. In this section we derive a feedback method which uses the methods from Section 2.5 to correct population eigenvalue estimates.
But as noted in Section 2.5, we do not actually estimate the sample eigenvalues, but the convoluted sample eigenvalue density${\u011d}_{y}\left(l\right)$. We therefore convolve the empirical distribution of the measured sample eigenvalue set with the Cauchy density, resulting in g _{ y }(l), and compare these two densities.
where we use the natural logarithm for log.
This is still a valid cost function: it is still 0 if and only if${g}_{y}\left(l\right)={\u011d}_{y}\left(l\right)$ and larger than 0 for any mismatch in distributions. Furthermore, the focus on the tails is still reduced since$\underset{\mathrm{a\downarrow}0}{\text{lim}}a\stackrel{2}{\text{log}}\frac{a}{b}=0$. Note also that we chose g _{ y }(l) as denominator since it is never zero for y > 0, because the Cauchy convolution kernel is never zero if y > 0.
2.6.3 Maintaining order among eigenvalues
For most of the methods presented in the previous sections, it is necessary that the eigenvalues are sorted in order of value and that they keep this order during updating. If the order is not maintained, one of the problems that may occur is oscillation:${\stackrel{~}{\lambda}}_{k}$ may switch places with ${\stackrel{~}{\lambda}}_{k+1}$ in one iteration and switch back to the next iteration. Other eigenvalue correction methods had the same problem. Therefore, Stein presented an algorithm to ensure order preservation during eigenvalue updating [[28]]. We used an isotonic tree algorithm for this purpose, described in [[10], which has several advantages over the algorithm of Stein.
2.7 Correction of the null space
A problem in eigenvalue correction occurs in underdetermined cases, which are characterized by N being smaller than p. In this case the data matrix has a zero space and p - N + 1 sample eigenvalues are necessarily zero, so the correction tries to estimate p population eigenvalues from N - 1 non-zero sample eigenvalues.
A related effect of underdetermination is that the sample eigenvectors in the null space form a random orthogonal basis. Without additional information, correction of the zero-valued sample eigenvalues with varying values results in randomness in the correction. This suggests that for correction all zero-valued sample eigenvalues should be given an equal value.
This entropy is maximized if the determinant is maximized, which is the product of the eigenvalues. With the constraint that the sum of the eigenvalues remains constant, the maximum of the product is achieved when all eigenvalues are equal. This is thus the maximum entropy solution.
3 Experimental validation
In the following sections we present three experiments: In the first experiment we illustrate some of the characteristics of the population eigenvalue to sample eigenvalue methods. In the second experiment we compare the performance of the fixed point eigenvalue correction method with an implementation we made of a state-of-the-art correction method by Karoui and a bootstrap correction method. In the third experiment we apply the correction method in a verification experiment, with a configuration often encountered in face recognition: a high number of samples with high dimensionality, where the number of samples is smaller than the dimensionality of the samples.
3.1 Population to sample eigenvalue results
In Section 2.5 we derived two algorithms to find the sample eigenvalue distribution given a set of population eigenvalues: a polynomial algorithm (Section 2.5.1) and a fixed point algorithm (Section 2.5.2). We noted two characteristics of the methods: the polynomial algorithm will have problems if the number of eigenvalue clusters increases, and the fixed point method will require more iterations before convergence occurs if the smoothness factor is decreased.
To demonstrate these characteristics we estimated the sample eigenvalue densities in three different settings: First we estimate the sample eigenvalue density of belonging to a population eigenvalue set with half of the eigenvalues equal to 1 and the other half equal to 2, with the ratio between the dimensionality of the samples and the number of samples equal to 0.01 and with a smoothness factor y (Equation 7) of 0.01 as well. In the second experiment we lower the smoothness factor to 10^{-5}. In the third experiment we set the smoothness factor back to 0.01, but the population eigenvalue set is divided in 20 clusters uniformly distributed between 0.1 and 2.
A reference density is obtained as follows: First a synthetic data set is generated with the same parameters as in the experiments described. Then the sample eigenvalues of synthetic data are calculated. The corresponding empirical density function is then convolved with a Cauchy kernel with the same width as the smoothness factor.
Figure 7b shows that when the smoothness factor is decreased, the fixed point algorithm has not converged on all positions if the number of iterations is kept the same. After increasing the number of iterations, the fixed point algorithm converged on all points again (not shown). Note that the reference distribution is still convolved with a Cauchy kernel of width 0.01 so variations due to local details are kept small.
If the number of eigenvalue clusters is increased, the roots of the polynomial method become unstable and the estimation fails as shown in Figure 7c. The fixed point method is still accurate.
3.2 Sample to population eigenvalue results
As noted earlier, the more common problem is how to get from the measured sample eigenvalues an estimate of the population eigenvalues. Two methods to solve this problem were described in Section 2.6: a direct estimation method and a fixed point feedback loop method.
3.2.1 Direct estimation results
Some tests on the direct estimation method (Section 2.6.1) showed that the method has several implementation flaws. A major flaw is that it results in an estimate of the population eigenvalue density convolved with the Cauchy kernel instead of the population eigenvalues. Because the Cauchy kernel has infinite variance, this poses the problem that the spread in population eigenvalues keeps increasing with an increasing number of eigenvalues. The smaller eigenvalues eventually even end up with values below zero. Because of this flaw, we did no further experiments.
3.2.2 Fixed point correction results
The second method is based on using the fixed point algorithm in Section 2.5.2 in a feedback loop as described in Section 2.6.2. In [10] we compared an eigenvalue correction method based on bootstrapping with our implementation of the method developed by Karoui. In the next experiment we repeat the comparison but we also include the iterative feedback algorithm.
The experimental set-up is as follows: Synthetic data is generated by drawing N samples from$\mathcal{N}\left(0,\mathbf{D}\right)$, a p-variate normal distribution with zero mean and with diagonal matrix D as covariance matrix. From the data the sample eigenvalues are determined and afterwards these sample eigenvalues are corrected with the three correction methods.
After repeating these experiments a number of times, a histogram per correction method can be determined.
We used the Levy distance to make the experiments comparable with the experiments in [7]. But, as we showed in [10], the levy distance has several disadvantages, one being that the distance measure is not scale independent.
The population eigenvalues per experiment
Experiment | Λ | Description |
---|---|---|
1 | λ _{ k } = 1 | Identity |
2 | λ _{ k } = 1|k = 1…50 | 2 Cluster |
λ _{ k } = 2|k = 51…100 | ||
3 | λ _{ k } = 1 + k/100 | Slope |
4 | Eigenvalues of Toeplitz matrix | Toeplitz |
5 | λ _{ k } = 100/k | 100 over f |
6 | λ _{ k } = 1 + k/600 | Underdetermined slope |
Experiments 1, 2, and 4 are repetitions of the experiments done by Karoui. We added experiment 5 because a 100 over f model is a common model for eigenvalues estimated from facial data (see [29–31]), even though its limiting distribution is 0 for the (GSA) limit. Another characteristic of facial data is that these are underdetermined. The performance of the correction methods under such conditions is measured by experiment 6. To compare these performances with the performance if there are more samples than dimensions, experiment 3 is introduced.
So in the experiment set-ups by Karoui, the fixed point correction does not excel, but it always performs reasonably. However, in the last two experiments which are based on real-life settings, the results are different: in both the 100 over f configuration and the underdetermined slope configuration, the fixed point method outperforms both methods clearly.
Furthermore, our implementation of the Karoui correction shows that several population eigenvalues are estimated as zero valued. This becomes problematic if the training results are used, for example, for likelihood estimates.
3.3 Correction applied in verification experiments
As indicated in the previous section, bias correction can be used to improve likelihood estimates. In biometrics, a common approach to make automated verification decisions (that is, reject or accept the claim that a person has a certain identity based on a comparison of some measured characteristics with a template) is to model both the variations between samples coming from different persons and the variations between samples coming from the same person with normal distributions. The parameters of these distributions are estimated from a set of examples, the training set. For many biometric modalities the number of samples available for training is in the same order as the dimensionality of these samples.
To show that bias reduction can, at least in theory, improve verification performance, we did a verification experiment with synthetic data, where the parameters of the distributions from which the synthetic samples are drawn have been set to the estimates obtained from facial image data. The dimensionality p of the facial data samples and the synthetic data is 8,762. The training set contained 7,047 samples of 400 individuals.
Note that both our implementation of Karoui’s method and the bootstrap method cannot be used. Karoui cannot be used because the system is underdetermined (N < p), and as shown in the previous experiments, Karoui results often in zero-valued eigenvalues. The evaluation of the likelihood functions requires the inverse of the covariance matrix, which cannot be done if some of the eigenvalues are zero.
The bootstrap algorithm requires usually at least 25 iterations to converge, which results in a run time of several days for the values of p and N in the experimental system. This run time is unacceptable in most applications.
The results show that the classical PCA reduction method will already result in highly separable likelihood scores (Figure 10a); the distance between the two clusters has increased considerably when using the fixed point eigenvalue correction (Figure 10b).
We also attempted to do correction in an experiment with real face data. However, we found that correction actually decreases the verification performance. This can be explained with the error in the data model we use as we reported in [31]. The smaller eigenvalues are particularly affected by the modeling error. Since eigenvalue correction will increase these smaller eigenvalues, it can explain why the performance actually decreases.
4 Conclusions
We presented a study of estimating population eigenvalues in the case that we have a large, but not infinite, number of samples and a large, but not infinite, number of dimensions. In such problems, the sample eigenvalues are biased. The MP equation only describes the relation between the sample eigenvalue distribution and the sample eigenvalue distribution for the cases that both the number of samples and their dimensionality are infinite, so using the (MP) equation to remove the bias in practical problems is not straightforward.
To solve this problem, we showed that by setting I{z} either small or large in the (MP) equation, we can focus more on local details or global characteristics of the involved eigenvalue distributions, where we assumed that global characteristics converge for much lower p and N values, and p and N only have to close to infinite if we are interested at very local characteristics. From these observations we derived methods, one of which is new to our knowledge, for estimating the sample eigenvalue density for a given set of population eigenvalues. The most important application of these methods is in a feedback algorithm which estimates the population eigenvalues from sample eigenvalues.
In the feedback algorithm, the value of I{z} determines how the estimated sample eigenvalue density and the empirical distribution of the measured sample eigenvalues are smoothed before they are compared. Increasing I{z} when both p and N are limited reduces the influence of statistical noise in the correction at the price of loosing details of the population eigenvalue density.
We showed that the feedback algorithm particularly outperforms other methods in the underdetermined configurations and configurations where individual eigenvalues are of importance, such as the set described by a 1 over f distribution, which is often encountered in biometrics. In a verification experiment, application of the feedback method results in a large increase of the distance between impostor and genuine scores. The difference between the synthetic scores of the classical PCA method and the scores achieved using real data suggests that the bias in the sample eigenvalues is not the only problem in face data though. Eigenvalue correction can actually increase the effect of modeling errors and therefore result in a decreased performance.
If the distribution of the data is (approximately) known, finite sample size eigenvalue distributions have been determined for several data distributions. These solution can take advantage of details lost in the limit analysis used for deriving the (MP) equation. The transition point when one approach outperforms the other is at this time difficult to determine, partially because convergence behavior is still a topic of study for the (MP) equation. A disadvantage for distribution-specific approaches is that unless prior knowledge is available, the data distribution should be tested. For some of these tests it has already been shown that their accuracy is negatively affected by increased dimensionality of the data. In previous studies we already saw that for large dimensionality, (GSA)-based methods outperformed a data distribution-specific method. How the relation is with other distribution specific methods is however still an open question.
Appendix 1
Proof influence of parts of the distribution on the Stieltjes transform
so the norm of the derivative is a function which has a maximum at ℜ{z} = l _{1} and its width is proportional to I{z}.
where $t=\frac{{l}_{1}-\Re \left\{z\right\}}{I\left\{z\right\}}$.
Appendix 2
Proof result integration along circle stays within circle
where ${\left(r-\mathrm{\u0131q}\right)}^{-1}=\frac{\u0131}{2q}\left(\text{cos}\phi \left(r\right)+\u0131\left(sin\phi \left(r\right)+1\right)\right)$.
Appendix 3
Proof fixed point in fixed point solution
Note that the minimum norm of A _{ n } is determined by $\frac{1}{max\left|{v}_{\infty}\left(z\right)\right|}=I\left\{z\right\}$, so the minimum norm of A _{ n } is equal to the smoothness factor. Therefore, setting the smoothness factor arbitrarily large will result in an arbitrarily low ratio of Equation 36, guaranteeing convergence after some threshold in the value of the smoothness factor.
A minimum value of the smoothness factor can be derived after which convergence is guaranteed. Assume that 0 < γ < 1. Then if both maximums in Equation 38 get close to 1, the ratio of Equation 36 becomes smaller than 1.
We will focus on the first ratio, since the argument on the second ratio is similar. Given |λ + A _{ n }| > λ, the ratio $\left(max\left|\frac{\lambda}{\lambda +{A}_{n}}\right|\right)$ is smaller than 1, therefore convergence is guaranteed. Setting the smoothness factor larger than 2λ _{max}, where 2λ _{max} = maxλ _{ k }, will result in a minimum norm of A _{ n } of 2λ _{max}. This results in a ratio lower than 1, guaranteeing convergence of the algorithm. There is even a lower setting for the smoothness factor since A _{ n } attains its minimum norm when it is purely imaginary. In that case, the norm has an upper limit of $\frac{1}{\sqrt{5}}$.
Appendix 4
Underdetermination in high-dimensional problems
In the experiments we suggest that if the number of samples N is below the dimensionality of the samples p, the correction of the sample eigenvalues is an underdetermined problem. In the following section we prove that if γ → ∞, all characteristics of the population eigenvalue distribution are lost except for its mean, showing that in that limit the sample eigenvalue correction is indeed a severely underdetermined problem. Because H(λ) describes the population eigenvalues, H(λ) = 0 ∀ λ ≤ 0. We also assume the eigenvalues have a supremum λ _{sup}, so H(λ) = 0 ∀ λ>λ _{sup}.
So the assumption O(‖v _{ ∞ }(z)‖) = O(γ ^{ a }) with a > 0 leads to the contradiction that $O\left(\Vert \frac{1}{{v}_{\infty}\left(z\right)}\Vert \right)$ is both O(γ ^{-a }) and O(γ ^{1-a }).
So this is again a contradiction: $O\left(\Vert \frac{1}{{v}_{\infty}\left(z\right)}\Vert \right)$ should be both O(γ ^{0}) and O(γ ^{1}).
So if we set a = -1, both arguments result in $O\left(\Vert \frac{1}{{v}_{\infty}\left(z\right)}\Vert \right)=O\left(\gamma \right)$ or O(‖v _{ ∞ }(z)‖) = O(γ ^{-1}).
which is the Stieltjes transform of $\stackrel{\u0308}{G}\left(x\right)=u\left(x-\gamma \stackrel{\u0304}{\lambda}\right)$, so the sample eigenvalue set will converge to a set of n eigenvalues equal to $\gamma \stackrel{\u0304}{\lambda}$ and p - n eigenvalues equal to 0, whatever the population eigenvalue distribution, if it has a bounded support.
Declarations
Authors’ Affiliations
References
- Jaynes E: On the rationale of maximum entropy methods. Proc. IEEE, Spec Issue on Spectral Estimation 1982, 70: 939-952.Google Scholar
- Särelä J, Vigário R: Overlearning in marginal distribution-based ICA: analysis and solutions. J. Mach. Learn. Res. 2004, 4(7–8):1447-1469.MathSciNetMATHGoogle Scholar
- Bai ZD: Methodologies in spectral analysis of large dimensional random matrices, a review. Statistica Sinica 1999, 9: 611-677.MathSciNetMATHGoogle Scholar
- Hendrikse A, Veldhuis R, Spreeuwers L: Improved variance estimation along sample eigenvectors. In Proceedings of the 30th Symposium on Information Theory in the Benelux. Werkgemeenschap voor Informatie- en Communicatietheorie Eindhoven; 28–29 May 2009:25-32.Google Scholar
- Bai ZD, Saranadasa H: Effect of high dimension: by an example of a two sample problem. Statistica Sinica 1996, 6: 311-329.MathSciNetMATHGoogle Scholar
- Phillips PJ, Flynn PJ, Scruggs T, Bowyer KW, Chang J, Hoffman K, Marques J, Min J, Worek W: Overview of the face recognition grand challenge. In CVPR ’05: Proceedings of the 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR’05). Washington, DC; 2005:947-954.Google Scholar
- El Karoui N: Spectrum estimation for large dimensional covariance matrices using random matrix theory. Ann. Stat. 2008, 36(6):2757-2790. 10.1214/07-AOS581MathSciNetView ArticleMATHGoogle Scholar
- Marčenko VA, Pastur LA: Distribution of eigenvalues for some sets of random matrices. Math. USSR - Sbornik 1967, 1(4):457-483. 10.1070/SM1967v001n04ABEH001994View ArticleGoogle Scholar
- Silverstein JW: Strong convergence of the empirical distribution of eigenvalues of large dimensional random matrices. J. Multivar. Anal 1995, 55(2):331-339. 10.1006/jmva.1995.1083MathSciNetView ArticleMATHGoogle Scholar
- Hendrikse AJ, Spreeuwers LJ, Veldhuis RNJ: A bootstrap approach to eigenvalue correction. In ICDM ’09. IEEE Computer Society Press Miami, Florida; 2009:818-823.Google Scholar
- Girko V: Theory of Random Determinants. Kluwer, Boston; 1990.View ArticleGoogle Scholar
- Tulino AM, Verdú S: Random Matrix Theory and Wireless Communications. Now Publishers Inc., Norwell; 2004.MATHGoogle Scholar
- Maaref A, Aissa S: Eigenvalue distributions of Wishart-type random matrices with application to the performance analysis of MIMO MRC systems. Trans. Wireless. Comm 2007, 6(7):2678-2689. 10.1109/TWC.2007.05990View ArticleGoogle Scholar
- Neeser F, Massey J: Proper complex random processes with applications to information theory. IEEE Trans Inf. Theory 1993, 39(4):1293-302. 10.1109/18.243446MathSciNetView ArticleMATHGoogle Scholar
- Anderson TW: An Introduction to Multivariate Statistical Analysis. Wiley Series in Probability and Mathematical Statistics. Wiley, New York; 1984.Google Scholar
- Muirhead RJ: Aspects of multivariate statistical theory. (Wiley Series in Probability and Mathematical Statistics. Wiley, New York; 1982.View ArticleGoogle Scholar
- Hendrikse AJ, Veldhuis RNJ, Spreeuwers LJ, Bazen AM: Analysis of eigenvalue correction applied to biometrics. In Advances in Biometrics, Alghero, Italy, Volume 5558/2009 of Lecture Notes in Computer Science. Springer Verlag Berlin /Heidelberg; 2009:189-198.Google Scholar
- Saff EB, Snider AD: Fundamentals of Complex Analysis with Applications to Engineering, Science, and Mathematics. Pearson Education Upper Saddle River; 2003.MATHGoogle Scholar
- Tsai S: Characterization of Stieltjes transforms 2000. , Accessed 11 June 2013 http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/getfile?URN=etd-0626100-163925%26filename=qq.pdf%26ei=0py3Uci1Huq90QWsi4DIBA%26usg=AFQjCNEE1lvVNJAYZ59IjPIFTQyS7KpNdA
- Rao NR, Edelman A: The polynomial method for random matrices. Foundations Comput Math. 2008, 8: 649-702. [http://dl.acm.org/citation.cfm?id=1474542.1474546] [] 10.1007/s10208-007-9013-xMathSciNetView ArticleMATHGoogle Scholar
- Wilkinson JH: Rounding errors in algebraic processes. Notes on applied science. Prentice Hall, Englewood Cliffs; 1963.Google Scholar
- Reichel L: On polynomial approximation in the complex plane with application to conformal mapping. Comput. Math 1985, 44(170):425-433. 10.1090/S0025-5718-1985-0777274-0MathSciNetView ArticleMATHGoogle Scholar
- Sitton G, Burruns S, Fox JW, Trietel S: Factoring very high degree polynomials. IEEE Signal Process Mag. 2003, 20(6):27-42. 10.1109/MSP.2003.1253552View ArticleGoogle Scholar
- Istrăţescu VI: Fixed Point Theory: An Introduction. vol. 7 of Mathematics and its Applications. D Reidel Publishing Co, Dordrecht; 1981.View ArticleGoogle Scholar
- Carrier J, Greengard L, Rokhlin V: A fast adaptive multipole algorithm for particle simulations. SIAM J. Sci. Stat. Comput. 1988, 9(4):669-686. 10.1137/0909044MathSciNetView ArticleMATHGoogle Scholar
- Greengard L, Rokhlin V: A fast algorithm for particle simulations. J Comput. Phys. 1987, 73(2):325-348. 10.1016/0021-9991(87)90140-9MathSciNetView ArticleMATHGoogle Scholar
- Gu M, Eisenstat SC: A divide-and-conquer algorithm for the symmetric TridiagonalEigenproblem. SIAM J. Matrix Anal. Appli. 1995, 16: 172-191. 10.1137/S0895479892241287MathSciNetView ArticleMATHGoogle Scholar
- Stein C: Lectures on the theory of estimation of many parameters. J Math. Sci. 1986, 34: 1371-1403.View ArticleGoogle Scholar
- Jiang X, Mandal B, Kot A: Eigenfeature regularization extraction in face recognition. IEEE Trans. Pattern Anal Mach. Intell. 2008, 30(3):383-394.View ArticleGoogle Scholar
- Moghaddam B, Pentland A: Probabilistic visual learning for object representation. IEEE Trans. Pattern Anal Mach. Intell. 1997, 19: 696-710. 10.1109/34.598227View ArticleGoogle Scholar
- Hendrikse AJ, Veldhuis RNJ, Spreeuwers LJ: The effect of position sources on estimated eigenvalues in intensity modeled data. In Thirty-first Symposium on Information Theory in the Benelux. Werkgemeenschap voor Informatie- en Communicatietheorie, Rotterdam, 11–12; May 2010:105-112.Google Scholar
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